METHODS IN QUANTITATIVE BIOLOGY

BMI/COMPSCI 775

Introduces networks as a powerful representation in many real-world domains including biology and biomedicine. Encompasses theory and applications of networks, also referred to as graphs, to study complex systems such as living organisms. Surveys the current literature on computational, graph-theoretic approaches that use network algorithms for biological modeling, analysis, interpretation, and discovery. Enables hands-on experience in network biology by implementing computational projects.

MM&I 760

An overview of methods used in quantitative systems biology, with a focus on biochemical systems relevant to the study of host-pathogen interactions, disease and microbial communities.

ABT 780

Advances the development of competencies promoting efficient analysis of biological data. Emphasizes matching a research problem with the most effective tools for its completion, balancing use of existing software and de novo software development. Advanced aspects of Python and R, algorithmics, machine learning, simulations, and effective communication of results are emphasized.

BMI/STAT 877

Statistical and computational methods in statistical genomics for human and experimental populations. Review methods for quality control, experimental design, clustering, network analysis, and other downstream analysis of next-generation sequencing studies along with methods for genome wide association studies.

BIOCHEM/BMI/BMOLCHEM/MATH 609

Provides a rigorous foundation for mathematical modeling of biological systems. Mathematical techniques include dynamical systems and differential equations. Applications to biological pathways, including understanding of bistability within chemical reaction systems, are emphasized.