BIOMEDICAL OPTICS AND BIOPHOTONICS

ECE 434

Introduction to ray optics, physical optics and interference, applications of Fourier optics, absorption, dispersion, and polarization of light. Light sources, including lasers (gas, solid state, and semiconductor), modulation and detection of light.

BME/CHEM/MEDPHYS 750

Covers several aspects of state-of-the-art biological and biophysical imaging with an emphasis on instrumentation, beginning with an overview of geometrical optics and optical and fluorescence microscopy. The bulk of the course will focus on advanced imaging techniques including nonlinear optical processes (multi-photon excitation, second harmonic generation, and stimulated Raman processes) and emerging super-resolution methods. Special emphasis will be given to current imaging literature and experimental design. Knowledge of physics-based optics [such asPHYSICS 202] strongly recommended.

BME 604

Various special topics in biomedical imaging and optics.

BMI/COMPSCI/ECE/MEDPHYS 722

Computational imaging includes all imaging methods that produce images as a result of computation on collected signals. Learn the tools to design new computational imaging methods to solve specific imaging problems. Provides an understanding of the physics of light propagation and measurement, and the computational tools to model it, including wave propagation, ray tracing, the radon transform, and linear algebra using matrix and integral operators and the computational tools to reconstruct an image, including linear inverse problems, neural networks, convex optimization, and filtered back-projection. Covers a variety of example computational imaging techniques and their applications including coded apertures, structured illumination, digital holography, computed tomography, imaging through scattering media, compressed sensing, and non-line-of-sight imaging.

BME 651

Learn and apply the fundamentals of optical imaging, microscopy and instrumentation via practical hands-on training with a specific emphasis on the life-sciences applications. Topics include constructing imaging systems using fundamental optical tools and instruments, illumination and aberrations, microscopy techniques, resolution and contrast measurement, optical spectroscopy, nanophotonics, bioimaging and biosensing.