# ONCOLOGY 778: Bioinformatics for Biologists | UW–Madison [View on UW Courses](https://uwcourses.com/courses/ONCOLOGY_778) ## Dataset ### revision e243353dcb7d79b7247ced91d69443ef4c2a6349 ### repository twangodev/uwcourses ### schema version 6 ### importer version 7 ### projection id 52a78527ff09011d88cb04c7d43867d9fbfec2930bf1dd2ec359ebd2844e0b07 ### observed at 2026-09-07T15:55:43.033547+00:00 ### built at 2026-09-10T19:50:42.743001+00:00 ### courses 8951 ### current instructors 5754 ### limited false ### terms * 1272 * 1264 * 1262 * 1254 * 1252 * 1244 * 1242 * 1234 * 1232 * 1224 * 1222 * 1212 * 1204 * 1202 * 1194 * 1192 * 1184 * 1182 * 1174 * 1172 * 1164 * 1162 * 1154 * 1152 * 1144 * 1142 * 1134 * 1132 * 1124 * 1122 * 1114 * 1112 * 1104 * 1102 * 1094 * 1092 * 1084 * 1082 * 1074 * 1072 ### term 1272 ### departments | subject | count | | --------- | ----- | | AAE | 90 | | ABT | 20 | | ACCTIS | 36 | | ACTSCI | 14 | | AFAERO | 10 | | AFRICAN | 87 | | AFROAMER | 71 | | AGROECOL | 21 | | AMERIND | 53 | | ANAT\&PHY | 7 | | ANATOMY | 2 | | ANESTHES | 8 | | ANSCI | 57 | | ANTHRO | 95 | | ART | 125 | | ARTED | 10 | | ARTHIST | 121 | | ASIALANG | 129 | | ASIAN | 109 | | ASIANAM | 28 | | ASTRON | 38 | | ATMOCN | 69 | | BIOCHEM | 51 | | BIOCORE | 10 | | BIOLOGY | 14 | | BIOMDSCI | 18 | | BME | 66 | | BMI | 41 | | BMOLCHEM | 10 | | BOTANY | 69 | | BSE | 44 | | C\&ESOC | 73 | | CBE | 48 | | CHEM | 101 | | CHICLA | 52 | | CIVENGR | 133 | | CLASSICS | 47 | | CNP | 10 | | CNSRSCI | 50 | | COMARTS | 137 | | COMPBIO | 15 | | COMPLIT | 11 | | COMPSCI | 138 | | COUNPSY | 78 | | CRB | 19 | | CS\&D | 71 | | CSCS | 40 | | CURRIC | 193 | | DANCE | 93 | | DERM | 8 | | DS | 88 | | DYSCI | 35 | | ECE | 155 | | ECON | 145 | | EDPOL | 114 | | EDPSYCH | 97 | | ELPA | 70 | | EMA | 53 | | EMERMED | 17 | | ENGL | 206 | | ENTOM | 40 | | ENVIRST | 148 | | EP | 15 | | EPD | 67 | | ESL | 16 | | F\&WECOL | 60 | | FAMMED | 22 | | FINANCE | 50 | | FOLKLORE | 40 | | FOODSCI | 43 | | FRENCH | 63 | | GEN\&WS | 145 | | GENBUS | 72 | | GENECSLR | 17 | | GENETICS | 60 | | GEOG | 113 | | GEOSCI | 83 | | GERMAN | 82 | | GLE | 48 | | GNS | 38 | | GREEK | 27 | | HDFS | 41 | | HEBR-BIB | 13 | | HEBR-MOD | 10 | | HISTORY | 233 | | HISTSCI | 56 | | HONCOL | 13 | | ILS | 43 | | INFOSYS | 9 | | INTEGART | 7 | | INTEGSCI | 22 | | INTER-AG | 18 | | INTER-HE | 11 | | INTER-LS | 22 | | INTEREGR | 16 | | INTLBUS | 21 | | INTLST | 50 | | ISYE | 83 | | ITALIAN | 53 | | JEWISH | 56 | | JOURN | 88 | | KINES | 128 | | LACIS | 26 | | LANDARC | 61 | | LATIN | 24 | | LAW | 120 | | LEGALST | 48 | | LINGUIS | 35 | | LIS | 89 | | LITTRANS | 78 | | LSC | 52 | | M\&ENVTOX | 7 | | MARKETNG | 62 | | MATH | 153 | | MDGENET | 8 | | ME | 130 | | MEDHIST | 43 | | MEDICINE | 60 | | MEDIEVAL | 32 | | MEDPHYS | 39 | | MEDSC-M | 29 | | MEDSC-V | 41 | | MHR | 68 | | MICROBIO | 45 | | MILSCI | 16 | | MM\&I | 22 | | MOLBIOL | 6 | | MS\&E | 59 | | MUSIC | 165 | | MUSPERF | 126 | | NAVSCI | 20 | | NE | 44 | | NEURODPT | 11 | | NEUROL | 7 | | NEURSURG | 4 | | NTP | 11 | | NURSING | 111 | | NUTRSCI | 65 | | OBS\&GYN | 18 | | OCCTHER | 39 | | ONCOLOGY | 14 | | OPHTHALM | 5 | | OTM | 43 | | PATH | 34 | | PATH-BIO | 29 | | PEDIAT | 26 | | PHARMACY | 31 | | PHILOS | 77 | | PHMCOL-M | 11 | | PHMPRAC | 45 | | PHMSCI | 60 | | PHYASST | 37 | | PHYSICS | 88 | | PHYSIOL | 3 | | PHYTHER | 37 | | PLANTSCI | 52 | | PLPATH | 35 | | POLISCI | 192 | | POPHLTH | 58 | | PORTUG | 33 | | PSYCH | 101 | | PSYCHIAT | 22 | | PUBAFFR | 54 | | PUBLHLTH | 23 | | RADIOL | 11 | | REALEST | 41 | | RELIGST | 90 | | RHABMED | 9 | | RMI | 24 | | RP\&SE | 102 | | S\&APHM | 17 | | SCANDST | 73 | | SLAVIC | 89 | | SOC | 149 | | SOCWORK | 87 | | SOILSCI | 46 | | SPANISH | 83 | | SRMED | 21 | | STAT | 94 | | STDYABRD | 52 | | STS | 8 | | SURGERY | 25 | | SURGSCI | 33 | | THEATRE | 91 | | URBRPL | 60 | | UROLOGY | 5 | | ZOOLOGY | 89 | ## course ### run id 20260907T155543-ce3781c4 ### semester 1272 ### observed at 2026-09-07 15:55:43.033547+00:00 ### record version id 3ec886509610011ebec571ae1cceac9284a84d8a33fd0c2dd98f3f21b0df5494 ### course id ONCOLOGY 778 ### course uid course\_ecc29614464b37fe303d907e ### catalog version id c8226b54cddb4c5486a5800b5ecc7d56e76adf15b7168664e197fdcde0721b44 ### course number 778 ### subjects * ONCOLOGY ### title BIOINFORMATICS FOR BIOLOGISTS ### description Become familiar with bioinformatics theory and principles. Provides real-world experience that can be applied to your own work. Provides a foundation of knowledge that can be used to critically evaluate existing bioinformatics tools that can be used in your work, and in the absence of an appropriate tool, identify the analyses that demand the development of novel tools. ### requirements text Consent of instructor ### credit offering ids None recorded. ### llm job id enrich-8b774950c2b6adfdc46d1b82 ### llm output id d7837248bddd4d7607e8d29d87a208e17c02303b1c087cf4317e7e2ee8a797d7 ### llm model nvidia/Qwen3.6-35B-A3B-NVFP4 ### llm model revision 1355db6a052410cfd62085d94b58866fd0f2c3c5 ### llm task version 14 ### llm search status valid ### llm summary BIOINFORMATICS FOR BIOLOGISTS teaches bioinformatics theory, tool evaluation, and identifying needs for novel tool development through real-world application. ### llm topics * Bioinformatics theory and principles * Existing bioinformatics tools * Development of novel tools ### llm skills * Understanding bioinformatics theory and principles * Critical evaluation of existing bioinformatics tools * Identifying needs for novel tool development ### llm assumed background None recorded. ### llm search phrases * bioinformatics tools evaluation * novel tool development analysis * oncology bioinformatics theory ### llm requirements status valid ### llm student summary status valid ### llm experience status insufficient\_evidence ### catalog variants None recorded. ### student summary #### context hash 4b9f310a2a15ccbd3d67b7d71a293da8f499b4ccc32fbf7f0b76f4b85512e440 #### course id ONCOLOGY 778 #### current instructors None recorded. #### difficulty workload None recorded. #### errors None recorded. #### historical context None recorded. #### message No course-specific reviews available #### offered false #### profile hash 5cb4dabf887cdbcd8c00d5a1312e10828b95c63f30bc3ea76aea199565390d02 #### quick take Recent recorded grades — Spring 2024: 3.58 GPA, 75.0% A/AB (n=12 letter grades); Spring 2025: 3.55 GPA, 72.7% A/AB (n=11 letter grades); Spring 2026: 3.86 GPA, 90.9% A/AB (n=11 letter grades). ```json { "citations": [ { "course_id": "ONCOLOGY 778", "run_id": "20260907T155543-ce3781c4", "source_record": { "entity_id": "d743f0e7-f168-3cb8-9ccf-1baaacc48d3d", "file": "tables/observations.parquet", "kind": "grades", "source": "madgrades" }, "table": "grades_latest", "term_id": "1244", "type": "grade" }, { "course_id": "ONCOLOGY 778", "run_id": "20260907T155543-ce3781c4", "source_record": { "entity_id": "d743f0e7-f168-3cb8-9ccf-1baaacc48d3d", "file": "tables/observations.parquet", "kind": "grades", "source": "madgrades" }, "table": "grades_latest", "term_id": "1254", "type": "grade" }, { "course_id": "ONCOLOGY 778", "run_id": "20260907T155543-ce3781c4", "source_record": { "entity_id": "d743f0e7-f168-3cb8-9ccf-1baaacc48d3d", "file": "tables/observations.parquet", "kind": "grades", "source": "madgrades" }, "table": "grades_latest", "term_id": "1264", "type": "grade" } ] } ``` #### student experience None recorded. #### task hash 74fb0997943e888960bbc9e47db8c4fd12e4292d55c20509d8d89db6a9910f68 #### teaching history None recorded. #### term id 1272 #### term name 2026 Fall #### version 2 ### requirements #### nodes ```json [ { "children": [], "condition": "Consent of instructor", "course": null, "evidence": "Consent of instructor", "id": "n0", "kind": "condition" } ] ``` #### notes None recorded. #### root n0 #### status parsed ### instructors None recorded. ### offerings None recorded. ### sections None recorded. ### grade instructors ```json [ { "instructor_uid": "instructor_20f6d521952ce973a40bf81d", "source": "madgrades", "source_instructor_id": "4959450", "identity_basis": "source_id", "identity_status": "source_identified", "name": "ERIC JOHANNSEN", "email": null, "first_observed_at": "2026-09-06 23:14:58.172943+00:00", "last_observed_at": "2026-09-07 15:55:43.033547+00:00", "grade_statistics": { "gpa": 3.781, "graded": 114, "counts": [ 83, 17, 10, 3, 1, 0, 0 ], "sections": 66 }, "instructor_url": "/instructors/ERIC_JOHANNSEN--instructor_20f6d521952ce973a40bf81d" } ] ``` ### grades ```json [ { "run_id": "20260907T155543-ce3781c4", "semester": "1272", "observed_at": "2026-09-07 15:55:43.033547+00:00", "course_id": "ONCOLOGY 778", "course_uid": "course_ecc29614464b37fe303d907e", "term_id": "1224", "term_name": "Spring 2022", "instructors": [ "Eric Johannsen" ], "a": 5, "ab": 3, "b": 2, "bc": 1, "c": 0, "d": 0, "f": 0, "satisfactory": 0, "unsatisfactory": 0, "credit": 0, "no_credit": 0, "passed": 0, "incomplete": 0, "no_work": 0, "not_reported": 0, "other": 0, "total": 11, "source_aliases": [ "ONCOLOGY 778" ] }, { "run_id": "20260907T155543-ce3781c4", "semester": "1272", "observed_at": "2026-09-07 15:55:43.033547+00:00", "course_id": "ONCOLOGY 778", "course_uid": "course_ecc29614464b37fe303d907e", "term_id": "1244", "term_name": "Spring 2024", "instructors": [ "Eric Johannsen" ], "a": 6, "ab": 3, "b": 2, "bc": 1, "c": 0, "d": 0, "f": 0, "satisfactory": 0, "unsatisfactory": 0, "credit": 0, "no_credit": 0, "passed": 0, "incomplete": 0, "no_work": 0, "not_reported": 0, "other": 0, "total": 12, "source_aliases": [ "ONCOLOGY 778" ] }, { "run_id": "20260907T155543-ce3781c4", "semester": "1272", "observed_at": "2026-09-07 15:55:43.033547+00:00", "course_id": "ONCOLOGY 778", "course_uid": "course_ecc29614464b37fe303d907e", "term_id": "1254", "term_name": "Spring 2025", "instructors": [ "Eric Johannsen" ], "a": 5, "ab": 3, "b": 2, "bc": 1, "c": 0, "d": 0, "f": 0, "satisfactory": 0, "unsatisfactory": 0, "credit": 0, "no_credit": 0, "passed": 0, "incomplete": 0, "no_work": 0, "not_reported": 0, "other": 0, "total": 11, "source_aliases": [ "ONCOLOGY 778" ] }, { "run_id": "20260907T155543-ce3781c4", "semester": "1272", "observed_at": "2026-09-07 15:55:43.033547+00:00", "course_id": "ONCOLOGY 778", "course_uid": "course_ecc29614464b37fe303d907e", "term_id": "1264", "term_name": "Spring 2026", "instructors": [ "Eric Johannsen" ], "a": 9, "ab": 1, "b": 1, "bc": 0, "c": 0, "d": 0, "f": 0, "satisfactory": 0, "unsatisfactory": 0, "credit": 0, "no_credit": 0, "passed": 0, "incomplete": 0, "no_work": 0, "not_reported": 0, "other": 0, "total": 11, "source_aliases": [ "ONCOLOGY 778" ] } ] ``` ### statistics #### gpa 3.633 #### graded 45 #### counts * 25 * 10 * 7 * 3 * 0 * 0 * 0 ### grade conflicts None recorded. ### evidence #### history * [/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/history/course\_ecc29614464b37fe303d907e-0.json](https://uwcourses.com/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/history/course_ecc29614464b37fe303d907e-0.json) #### traces * [/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/traces/course\_ecc29614464b37fe303d907e-0.json](https://uwcourses.com/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/traces/course_ecc29614464b37fe303d907e-0.json) #### results * [/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/results/course\_ecc29614464b37fe303d907e-0.json](https://uwcourses.com/data/e243353dcb7d79b7247ced91d69443ef4c2a6349/results/course_ecc29614464b37fe303d907e-0.json) ### revision e243353dcb7d79b7247ced91d69443ef4c2a6349 ## context ### all #### term #### gpa 3.6333333333333333 #### count 45 #### university ##### size 2749 ##### gpa Percentile 36 ##### count Percentile 17 ##### median Count 101 ##### histogram | range | count | current | | ------- | ----- | ------- | | 0.0–0.4 | 0 | false | | 0.4–0.8 | 0 | false | | 0.8–1.2 | 0 | false | | 1.2–1.6 | 0 | false | | 1.6–2.0 | 0 | false | | 2.0–2.4 | 1 | false | | 2.4–2.8 | 11 | false | | 2.8–3.2 | 183 | false | | 3.2–3.6 | 700 | false | | 3.6–4.0 | 1854 | true | #### departments | subject | comparison | | -------- | ---------- | | ONCOLOGY | | ### terms #### 1224 ##### term 1224 ##### gpa 3.5454545454545454 ##### count 11 ##### departments | subject | comparison | | -------- | ---------- | | ONCOLOGY | | #### 1244 ##### term 1244 ##### gpa 3.5833333333333335 ##### count 12 ##### departments | subject | comparison | | -------- | ---------- | | ONCOLOGY | | #### 1254 ##### term 1254 ##### gpa 3.5454545454545454 ##### count 11 ##### departments | subject | comparison | | -------- | ---------- | | ONCOLOGY | | #### 1264 ##### term 1264 ##### gpa 3.8636363636363638 ##### count 11 ##### departments | subject | comparison | | -------- | ---------- | | ONCOLOGY | | ### benchmarks #### all ##### school ###### size 2749 ###### gpa 3.67990775141199 ###### top Share 83.26243757582105 ###### count 101 #### terms ##### 1224 ###### school ###### size 1171 ###### gpa 3.5627882428500937 ###### top Share 76.37271640560496 ###### count 64 ##### 1244 ###### school ###### size 1241 ###### gpa 3.5975573126929192 ###### top Share 78.29036874847135 ###### count 65 ##### 1254 ###### school ###### size 1289 ###### gpa 3.6126423469389106 ###### top Share 79.48050408754871 ###### count 66 ##### 1264 ###### school ###### size 1283 ###### gpa 3.6229729166451925 ###### top Share 80.13669149396227 ###### count 66 ## instructor Trends ```json [ { "uid": "instructor_20f6d521952ce973a40bf81d", "name": "ERIC JOHANNSEN", "count": 45, "terms": [ { "term": "1224", "count": 11, "sections": 1, "gpa": 3.5454545454545454 }, { "term": "1244", "count": 12, "sections": 1, "gpa": 3.5833333333333335 }, { "term": "1254", "count": 11, "sections": 1, "gpa": 3.5454545454545454 }, { "term": "1264", "count": 11, "sections": 1, "gpa": 3.8636363636363638 } ] } ] ``` ## following None recorded.